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Gm20655 predicted gene 20655 [ Mus musculus (house mouse) ]

Gene ID: 102635429, updated on 8-Feb-2024

Summary

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Official Symbol
Gm20655provided by MGI
Official Full Name
predicted gene 20655provided by MGI
Primary source
MGI:MGI:5313102
See related
AllianceGenome:MGI:5313102
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
10 A2; 10 7.23 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (17659027..17711349, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (17783279..17835601, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_25877 Neighboring gene predicted gene, 32543 Neighboring gene predicted gene, 32656 Neighboring gene STARR-positive B cell enhancer mm9_chr10:17403687-17403988 Neighboring gene STARR-seq mESC enhancer starr_25879 Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:17442036-17442219 Neighboring gene STARR-positive B cell enhancer mm9_chr10:17442797-17443097 Neighboring gene STARR-seq mESC enhancer starr_25880 Neighboring gene Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 Neighboring gene STARR-seq mESC enhancer starr_25881 Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:17492350-17492503 Neighboring gene STARR-positive B cell enhancer ABC_E11755 Neighboring gene STARR-positive B cell enhancer ABC_E3877 Neighboring gene STARR-seq mESC enhancer starr_25882 Neighboring gene STARR-seq mESC enhancer starr_25884 Neighboring gene taxilin beta Neighboring gene chromodomain protein, Y chromosome-like pseudogene Neighboring gene STARR-seq mESC enhancer starr_25885 Neighboring gene predicted gene, 57800 Neighboring gene STARR-seq mESC enhancer starr_25887 Neighboring gene hdc homolog, cell cycle regulator Neighboring gene STARR-positive B cell enhancer mm9_chr10:17667807-17668108

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    17659027..17711349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004936459.1 RNA Sequence

  2. XR_871470.3 RNA Sequence

  3. XR_004936460.1 RNA Sequence

  4. XR_380133.3 RNA Sequence

  5. XR_871471.3 RNA Sequence

  6. XR_380134.4 RNA Sequence

  7. XR_001779720.2 RNA Sequence

  8. XR_003948832.1 RNA Sequence

  9. XR_380132.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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