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Gm29443 predicted gene 29443 [ Mus musculus (house mouse) ]

Gene ID: 102634559, updated on 8-Feb-2024

Summary

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Official Symbol
Gm29443provided by MGI
Official Full Name
predicted gene 29443provided by MGI
Primary source
MGI:MGI:5580149
See related
Ensembl:ENSMUSG00000100583 AllianceGenome:MGI:5580149
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
7 A2; 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (16347749..16366568)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (16613824..16632643)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 35 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene predicted gene, 17981 Neighboring gene STARR-positive B cell enhancer ABC_E1335 Neighboring gene STARR-positive B cell enhancer mm9_chr7:17219251-17219552 Neighboring gene predicted gene, 24708 Neighboring gene CEA cell adhesion molecule, pseudogene 1 Neighboring gene CEA cell adhesion molecule 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  3. The transcriptional landscape of the mammalian genome. Carninci P, et al. Science, 2005 Sep 2. PMID 16141072

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_136928.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CJ057075, CJ057125
    Related
    ENSMUST00000190297.7

  2. NR_136929.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CJ057125, CJ057213
    Related
    ENSMUST00000186708.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    16347749..16366568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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