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Gm31693 predicted gene, 31693 [ Mus musculus (house mouse) ]

Gene ID: 102634003, updated on 8-Feb-2024

Summary

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Official Symbol
Gm31693provided by MGI
Official Full Name
predicted gene, 31693provided by MGI
Primary source
MGI:MGI:5590852
See related
Ensembl:ENSMUSG00000105440 AllianceGenome:MGI:5590852
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm43673
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
3 A3; 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (21756979..21766624)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (21702815..21712460)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_07126 Neighboring gene STARR-seq mESC enhancer starr_07127 Neighboring gene predicted gene, 31610 Neighboring gene STARR-seq mESC enhancer starr_07128 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:21429924-21430107 Neighboring gene STARR-seq mESC enhancer starr_07129 Neighboring gene STARR-seq mESC enhancer starr_07130 Neighboring gene STARR-seq mESC enhancer starr_07131 Neighboring gene STARR-seq mESC enhancer starr_07132 Neighboring gene STARR-seq mESC enhancer starr_07133 Neighboring gene calponin 3, acidic pseudogene Neighboring gene STARR-seq mESC enhancer starr_07134 Neighboring gene RIKEN cDNA 7530428D23 gene Neighboring gene STARR-seq mESC enhancer starr_07136 Neighboring gene STARR-seq mESC enhancer starr_07138 Neighboring gene predicted gene, 31813 Neighboring gene STARR-seq mESC enhancer starr_07141 Neighboring gene STARR-positive B cell enhancer ABC_E6044 Neighboring gene STARR-positive B cell enhancer ABC_E4534 Neighboring gene STARR-positive B cell enhancer ABC_E4535

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    21756979..21766624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_389617.3 RNA Sequence

    Related
    ENSMUST00000200150.2
Nucleotide Protein Strain
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