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Gm28441 predicted gene 28441 [ Mus musculus (house mouse) ]

Gene ID: 102633688, updated on 8-Feb-2024

Summary

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Official Symbol
Gm28441provided by MGI
Official Full Name
predicted gene 28441provided by MGI
Primary source
MGI:MGI:5579147
See related
Ensembl:ENSMUSG00000100830 AllianceGenome:MGI:5579147
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
1 E4; 1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (133762927..133766110)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (133835189..133838372)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene ATPase, Ca++ transporting, plasma membrane 4 Neighboring gene STARR-seq mESC enhancer starr_02301 Neighboring gene microRNA 6903 Neighboring gene STARR-seq mESC enhancer starr_02302 Neighboring gene predicted gene, 53476 Neighboring gene STARR-seq mESC enhancer starr_02305 Neighboring gene predicted gene, 41954 Neighboring gene STARR-seq mESC enhancer starr_02307 Neighboring gene predicted gene, 31515 Neighboring gene opticin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    133762927..133766110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_387406.1 RNA Sequence

    Related
    ENSMUST00000190927.2
Nucleotide Protein Strain
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