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2610318M16Rik RIKEN cDNA 2610318M16 gene [ Mus musculus (house mouse) ]

Gene ID: 102632156, updated on 8-Feb-2024

Summary

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Official Symbol
2610318M16Rikprovided by MGI
Official Full Name
RIKEN cDNA 2610318M16 geneprovided by MGI
Primary source
MGI:MGI:1925643
See related
AllianceGenome:MGI:1925643
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 39.3) See more
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Genomic context

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Location:
14; 14 A1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (14098554..14102333, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (8367440..8371219)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene CFAP20 domain containing Neighboring gene STARR-seq mESC enhancer starr_35872 Neighboring gene predicted gene, 46492 Neighboring gene STARR-seq mESC enhancer starr_35871 Neighboring gene predicted gene, 41095 Neighboring gene STARR-seq mESC enhancer starr_35870 Neighboring gene STARR-seq mESC enhancer starr_35869 Neighboring gene cyclin B1 pseudogene Neighboring gene FAM3 metabolism regulating signaling molecule D Neighboring gene family with sequence similarity 107, member A Neighboring gene STARR-seq mESC enhancer starr_35868 Neighboring gene acyl-Coenzyme A oxidase 2, branched chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Characterization of the piRNA complex from rat testes. Lau NC, et al. Science, 2006 Jul 21. PMID 16778019
  2. A germline-specific class of small RNAs binds mammalian Piwi proteins. Girard A, et al. Nature, 2006 Jul 13. PMID 16751776
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_151471.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CT025547

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    14098554..14102333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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