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Gm26629 predicted gene, 26629 [ Mus musculus (house mouse) ]

Gene ID: 102631841, updated on 8-Feb-2024

Summary

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Official Symbol
Gm26629provided by MGI
Official Full Name
predicted gene, 26629provided by MGI
Primary source
MGI:MGI:5477123
See related
Ensembl:ENSMUSG00000097446 AllianceGenome:MGI:5477123
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
19 D1; 19
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (50665843..50767098)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (50677405..50778660)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_46394 Neighboring gene siah E3 ubiquitin protein ligase 1, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_46395 Neighboring gene STARR-seq mESC enhancer starr_46396 Neighboring gene ribosomal protein 13A, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_46397 Neighboring gene STARR-seq mESC enhancer starr_46398 Neighboring gene STARR-seq mESC enhancer starr_46399 Neighboring gene sortilin-related VPS10 domain containing receptor 1 Neighboring gene STARR-seq mESC enhancer starr_46400 Neighboring gene STARR-seq mESC enhancer starr_46401 Neighboring gene STARR-seq mESC enhancer starr_46402 Neighboring gene STARR-seq mESC enhancer starr_46403 Neighboring gene STARR-seq mESC enhancer starr_46404 Neighboring gene STARR-seq mESC enhancer starr_46406 Neighboring gene predicted gene, 25644 Neighboring gene STARR-seq mESC enhancer starr_46409 Neighboring gene STARR-seq mESC enhancer starr_46410 Neighboring gene STARR-seq mESC enhancer starr_46411 Neighboring gene ribosomal protein L31, pseudogene 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_166832.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC100726, AC162444
    Related
    ENSMUST00000180848.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    50665843..50767098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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