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MIR6829 microRNA 6829 [ Homo sapiens (human) ]

Gene ID: 102465977, updated on 10-Oct-2023

Summary

Official Symbol
MIR6829provided by HGNC
Official Full Name
microRNA 6829provided by HGNC
Primary source
HGNC:HGNC:50055
See related
Ensembl:ENSG00000276489 miRBase:MI0022674; AllianceGenome:HGNC:50055
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
hsa-mir-6829
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR6829 in Genome Data Viewer
Location:
3q29
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (195882329..195882395, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (198475647..198475713)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (195609200..195609266, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene vegetative cell wall protein gp1-like Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195543301-195544106 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:195547535-195548734 Neighboring gene OCT4-H3K4me1 hESC enhancer GRCh37_chr3:195550530-195551217 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_67540 and experimental_67545 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_67549, experimental_67550 and experimental_67551 Neighboring gene MPRA-validated peak4987 silencer Neighboring gene uncharacterized LOC107984010 Neighboring gene long intergenic non-protein coding RNA 1983 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195577694-195578194 Neighboring gene kinesin family member 3A pseudogene 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195586662-195587186 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195587187-195587709 Neighboring gene tyrosine kinase non receptor 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195604399-195604953 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195610157-195610657 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195613501-195614264 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195615031-195615794 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15041 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15042 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21059 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195623973-195624772 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195625602-195626282 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21060 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21061 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21062 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15043 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15044 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15045 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21063 Neighboring gene TNK2 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195641665-195642277 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195652784-195653752 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195653753-195654721 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195654722-195655690 Neighboring gene RNA, U2 small nuclear 11, pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_106887.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC124944
    Related
    ENST00000620375.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    195882329..195882395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    198475647..198475713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)