U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC01352 long intergenic non-protein coding RNA 1352 [ Homo sapiens (human) ]

Gene ID: 101929730, updated on 10-Oct-2023

Summary

Official Symbol
LINC01352provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1352provided by HGNC
Primary source
HGNC:HGNC:50578
See related
Ensembl:ENSG00000238078 AllianceGenome:HGNC:50578
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
1q41
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (220829255..220832429)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (220068972..220072146)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (221002597..221005771)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene mitochondrial amidoxime reducing component 1 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:220986059-220987258 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:220991871-220992562 Neighboring gene uncharacterized LOC124900455 Neighboring gene RNA, U6atac small nuclear 35, pseudogene Neighboring gene HLX antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1827 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:221053510-221054118 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:221064967-221065512 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:221065513-221066058 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:221067145-221067784 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:221069442-221070370 Neighboring gene H2.0 like homeobox Neighboring gene uncharacterized LOC105372930

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110797.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL445423, BC034007
    Related
    ENST00000431347.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    220829255..220832429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    220068972..220072146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)