U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CFAP97D2 CFAP97 domain containing 2 [ Homo sapiens (human) ]

Gene ID: 101929355, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
CFAP97D2provided by HGNC
Official Full Name
CFAP97 domain containing 2provided by HGNC
Primary source
HGNC:HGNC:53789
See related
Ensembl:ENSG00000283361 AllianceGenome:HGNC:53789
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
Orthologs
mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CFAP97D2 in Genome Data Viewer
Location:
13q34
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (114179257..114223085)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (113381291..113431745)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (114944732..114988560)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene RAS p21 protein activator 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114880307-114881171 Neighboring gene uncharacterized LOC124903221 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114882210-114883162 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114883163-114884114 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:114884948-114885289 Neighboring gene uncharacterized LOC107987192 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114892696-114893197 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114895306-114895935 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8055 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8056 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114897194-114897821 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5557 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114900119-114900619 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114906114-114907109 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8058 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8059 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114916272-114916772 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:114916773-114917273 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114927227-114928127 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114951001-114951592 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:114952186-114952777 Neighboring gene Sharpr-MPRA regulatory region 1096 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:114993807-114994308 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8061 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5558 Neighboring gene uncharacterized LOC105370384 Neighboring gene microRNA 548ar Neighboring gene cell division cycle 16 Neighboring gene microRNA 4502

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Identification of genes related to Parkinson's disease using expressed sequence tags. Kim JM, et al. DNA Res, 2006 Dec 31. PMID 17213182

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein CFAP97D2
Names
CFAP97 domain-containing protein 2
uncharacterized protein C17orf105 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001395229.1 → NP_001382158.1  uncharacterized protein CFAP97D2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL160396
    Consensus CDS
    CCDS91845.1
    UniProtKB/Swiss-Prot
    A0A1B0GU71
    Related
    ENSP00000489989.1, ENST00000636692.2
    Conserved Domains (1) summary
    pfam13879
    Location:27 → 98
    KIAA1430; KIAA1430 homolog

  2. NM_001395230.1 → NP_001382159.1  uncharacterized protein CFAP97D2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL160396
    Consensus CDS
    CCDS91844.1
    UniProtKB/TrEMBL
    A0A1B0GV50
    Related
    ENSP00000490372.1, ENST00000635901.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    114179257..114223085
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017020910.2 → XP_016876399.1  uncharacterized protein CFAP97D2 isoform X1

    UniProtKB/TrEMBL
    A0A2R8Y7J0
    Related
    ENSP00000496151.1, ENST00000646158.1
    Conserved Domains (1) summary
    pfam13879
    Location:27 → 110
    KIAA1430; KIAA1430 homolog

  2. XM_047430025.1 → XP_047285981.1  uncharacterized protein CFAP97D2 isoform X2

  3. XM_047430026.1 → XP_047285982.1  uncharacterized protein CFAP97D2 isoform X3

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    113381291..113431745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054373990.1 → XP_054229965.1  uncharacterized protein CFAP97D2 isoform X1

    UniProtKB/TrEMBL
    A0A2R8Y7J0
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A1B0GU71.1 GenPept UniProtKB/Swiss-Prot:A0A1B0GU71

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials