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DISC1FP1 DISC1 fusion partner 1 [ Homo sapiens (human) ]

Gene ID: 101929222, updated on 10-Oct-2023

Summary

Official Symbol
DISC1FP1provided by HGNC
Official Full Name
DISC1 fusion partner 1provided by HGNC
Primary source
HGNC:HGNC:33625
See related
Ensembl:ENSG00000261645 AllianceGenome:HGNC:33625
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Boymaw
Expression
Low expression observed in reference dataset See more
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Genomic context

See DISC1FP1 in Genome Data Viewer
Location:
11q14.3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (90251232..90915052)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (90171311..90836304)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (89984400..90648220)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902812 Neighboring gene NANOG hESC enhancer GRCh37_chr11:89961208-89961714 Neighboring gene Sharpr-MPRA regulatory region 337 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:89974290-89974542 Neighboring gene cysteine and histidine rich domain containing 1 Neighboring gene tubulin alpha pseudogene 2 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:90138436-90139016 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:90139017-90139595 Neighboring gene Sharpr-MPRA regulatory region 15479 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:90171133-90171860 Neighboring gene NANOG hESC enhancer GRCh37_chr11:90318470-90318971 Neighboring gene microRNA 4490 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5387 Neighboring gene NANOG hESC enhancer GRCh37_chr11:90470663-90471164 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:90508083-90508821 Neighboring gene microRNA 1261 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:90836591-90836792 Neighboring gene oxysterol binding protein like 9 pseudogene 2 Neighboring gene oxysterol binding protein like 9 pseudogene 3 Neighboring gene long intergenic non-protein coding RNA 2748

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
A genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl's gyrus.
EBI GWAS Catalog
Common genetic variation and the control of HIV-1 in humans.
EBI GWAS Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • DISC1 fusion partner 1 (non-protein coding)
  • DISC1/FP1 fusion

Clone Names

  • FLJ27116

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104190.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AP003058, CK000409
    Related
    ENST00000562245.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    90251232..90915052
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    90171311..90836304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)