U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101927845 uncharacterized LOC101927845 [ Homo sapiens (human) ]

Gene ID: 101927845, updated on 10-Oct-2023

Summary

Gene symbol
LOC101927845
Gene description
uncharacterized LOC101927845
See related
Ensembl:ENSG00000251218
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC101927845 in Genome Data Viewer
Location:
8q24.22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (134849935..134881899)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (135967838..135999784)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (135862178..135894142)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene zinc finger and AT-hook domain containing Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19568 Neighboring gene non-protein coding RNA 250 Neighboring gene microRNA 30d Neighboring gene NANOG hESC enhancer GRCh37_chr8:135937956-135938474 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:135976682-135977881 Neighboring gene ribosomal protein L23a pseudogene 56 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:136271585-136272217 Neighboring gene long intergenic non-protein coding RNA 1591

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.
EBI GWAS Catalog
Genome-wide association study meta-analysis reveals transethnic replication of mean arterial and pulse pressure loci.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125427.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC083843, AC103764
    Related
    ENST00000505083.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    134849935..134881899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    135967838..135999784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)