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DNM1P50 dynamin 1 pseudogene 50 [ Homo sapiens (human) ]

Gene ID: 101927579, updated on 10-Oct-2023

Summary

Official Symbol
DNM1P50provided by HGNC
Official Full Name
dynamin 1 pseudogene 50provided by HGNC
Primary source
HGNC:HGNC:48499
See related
AllianceGenome:HGNC:48499
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 3.6), thyroid (RPKM 1.9) and 24 other tissues See more
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Genomic context

Location:
15q13.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (30568598..30571721, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (28361845..28364966, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (30860801..30863924, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene MPHOSPH10 pseudogene 3 Neighboring gene golgin subfamily A member 6-like protein 1 Neighboring gene 15q13.2 beta inversion distal recombination region Neighboring gene golgin A8 family member Q Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:30852659-30853158 Neighboring gene RNA, 7SL, cytoplasmic 796, pseudogene Neighboring gene 15q13.2-13.3 gamma inversion proximal recombination region Neighboring gene ReSE screen-validated silencer GRCh37_chr15:30859663-30859840 Neighboring gene U8 small nucleolar RNA Neighboring gene ULK4 pseudogene 2 Neighboring gene ARHGAP11B divergent transcript Neighboring gene golgin A8 family member H Neighboring gene RNA, 7SL, cytoplasmic 628, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
A genome-wide association study and biological pathway analysis of epilepsy prognosis in a prospective cohort of newly treated epilepsy.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145478.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC026150, HY040841

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    30568598..30571721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_011332701.1 Reference GRCh38.p14 PATCHES

    Range
    2566916..2570039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_187660.1 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    2679400..2682523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    28361845..28364966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)