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LINC02359 long intergenic non-protein coding RNA 2359 [ Homo sapiens (human) ]

Gene ID: 101927464, updated on 25-Oct-2023

Summary

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Official Symbol
LINC02359provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2359provided by HGNC
Primary source
HGNC:HGNC:53280
See related
Ensembl:ENSG00000284848 AllianceGenome:HGNC:53280
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LINC02467
Expression
Restricted expression toward testis (RPKM 1.4) See more
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Genomic context

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See LINC02359 in Genome Data Viewer
Location:
12q24.32
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (126094143..126176807)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (126102922..126185597)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (126580538..126588478)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370058 Neighboring gene long intergenic non-protein coding RNA 2826 Neighboring gene uncharacterized LOC105370056 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:126535879-126537078 Neighboring gene NANOG hESC enhancer GRCh37_chr12:126592791-126593330 Neighboring gene uncharacterized LOC107984447 Neighboring gene transmembrane protein 132C pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr12:126717441-126718421 Neighboring gene NANOG hESC enhancer GRCh37_chr12:126727348-126727849 Neighboring gene uncharacterized LOC105379613 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:126835877-126836032

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Other Names

  • long intergenic non-protein coding RNA 2467

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110053.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005858
    Related
    ENST00000545642.1

  2. NR_186736.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005858
    Related
    ENST00000664730.1

  3. NR_186737.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005858
    Related
    ENST00000668523.1

  4. NR_186738.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005858, AC005888

  5. NR_186739.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005858, AC005888
    Related
    ENST00000654753.1

  6. NR_186740.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005858, AC005888
    Related
    ENST00000643016.1

  7. NR_186741.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005858, AC005888
    Related
    ENST00000658727.1

  8. NR_186742.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005888

  9. NR_186743.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005888

  10. NR_186744.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005888
    Related
    ENST00000654535.1

  11. NR_186745.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005888
    Related
    ENST00000666372.1

  12. NR_186746.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005888

  13. NR_186747.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005888

  14. NR_186748.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005888

  15. NR_186749.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005888
    Related
    ENST00000656545.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    126094143..126176807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    126102922..126185597
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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