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Ccp110 centriolar coiled coil protein 110 [ Mus musculus (house mouse) ]

Gene ID: 101565, updated on 2-Apr-2024

Summary

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Official Symbol
Ccp110provided by MGI
Official Full Name
centriolar coiled coil protein 110provided by MGI
Primary source
MGI:MGI:2141942
See related
Ensembl:ENSMUSG00000033904 AllianceGenome:MGI:2141942
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CP110; cep110; 6330503K22Rik
Summary
Involved in ciliary basal body organization; negative regulation of cilium assembly; and positive regulation of cilium assembly. Located in centriole. Is expressed in embryo; inner cell mass; and olfactory epithelium. Orthologous to human CCP110 (centriolar coiled-coil protein 110). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in testis adult (RPKM 18.6), CNS E11.5 (RPKM 17.0) and 16 other tissues See more
Orthologs
human all
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Genomic context

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Location:
7 F2; 7 63.58 cM
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (118311740..118336247)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (118712515..118737024)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene transmembrane channel-like gene family 5 Neighboring gene STARR-positive B cell enhancer mm9_chr7:125849164-125849465 Neighboring gene STARR-positive B cell enhancer ABC_E4970 Neighboring gene glycerophosphodiester phosphodiesterase 1 Neighboring gene STARR-positive B cell enhancer ABC_E4971 Neighboring gene STARR-positive B cell enhancer ABC_E1359 Neighboring gene VPS35 endosomal protein sorting factor like Neighboring gene STARR-positive B cell enhancer mm9_chr7:125909648-125909949 Neighboring gene STARR-seq mESC enhancer starr_20020 Neighboring gene predicted gene, 26147 Neighboring gene lysine rich nucleolar protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Current topics of functional links between primary cilia and cell cycle. Izawa I, et al. Cilia, 2015. PMID 26719793, Free PMC Article
  2. ENKD1 promotes CP110 removal through competing with CEP97 to initiate ciliogenesis. Song T, et al. EMBO Rep, 2022 May 4. PMID 35301795, Free PMC Article
  3. M-Phase Phosphoprotein 9 regulates ciliogenesis by modulating CP110-CEP97 complex localization at the mother centriole. Huang N, et al. Nat Commun, 2018 Oct 30. PMID 30375385, Free PMC Article
  4. CP110 suppresses primary cilia formation through its interaction with CEP290, a protein deficient in human ciliary disease. Tsang WY, et al. Dev Cell, 2008 Aug. PMID 18694559, Free PMC Article
  5. Cep97 and CP110 suppress a cilia assembly program. Spektor A, et al. Cell, 2007 Aug 24. PMID 17719545

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ENKD1 promotes CP110 removal through competing with CEP97 to initiate ciliogenesis.
    Title: ENKD1 promotes CP110 removal through competing with CEP97 to initiate ciliogenesis.
  2. CP110 is required for anchoring of basal bodies to the membrane during cilia formation. CP110 loss resulted in an abnormal distribution of core components of subdistal appendages and of recycling endosomes, which may be associated with premature extension of axonemal microtubules. CP110 has unique context-dependent functions, acting as both a suppressor and a promoter of ciliogenesis.
    Title: Centrosomal protein CP110 controls maturation of the mother centriole during cilia biogenesis.
  3. miR-129-3p, a microRNA conserved in vertebrates, controls cilia biogenesis in cultured cells by concomitantly downregulating CP110 and repressing branched F-actin formation.
    Title: miR-129-3p controls cilia assembly by regulating CP110 and actin dynamics.
Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Endonuclease-mediated (1) 

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell projection organization IEA
Inferred from Electronic Annotation
more info
  
involved_in centriole replication IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in centriole replication ISO
Inferred from Sequence Orthology
more info
  
involved_in centrosome duplication ISO
Inferred from Sequence Orthology
more info
  
involved_in ciliary basal body organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ciliary basal body organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of centriole elongation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in negative regulation of cilium assembly IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in negative regulation of cilium assembly ISO
Inferred from Sequence Orthology
more info
  
involved_in positive regulation of cilium assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of cytokinesis ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
is_active_in centriole IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in centriole IDA
Inferred from Direct Assay
more info
 PubMed 
located_in centriole ISO
Inferred from Sequence Orthology
more info
  
located_in centrosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in centrosome ISO
Inferred from Sequence Orthology
more info
 PubMed 
located_in cilium IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in microtubule organizing center IDA
Inferred from Direct Assay
more info
 PubMed 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 PubMed 

General protein information

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Preferred Names
centriolar coiled-coil protein of 110 kDa
Names
centrosomal protein CP110
centrosomal protein of 110 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001360793.1 → NP_001347722.1  centriolar coiled-coil protein of 110 kDa isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC152412, DV662471
    Conserved Domains (1) summary
    pfam16025
    Location:31 → 106
    CALM_bind; Calcium-dependent calmodulin binding

  2. NM_001360794.1 → NP_001347723.1  centriolar coiled-coil protein of 110 kDa isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC152412, DV662471
    UniProtKB/TrEMBL
    A0A140LJ44
    Related
    ENSMUSP00000147070.2, ENSMUST00000123178.8
    Conserved Domains (1) summary
    pfam16025
    Location:31 → 106
    CALM_bind; Calcium-dependent calmodulin binding

  3. NM_182995.2 → NP_892040.1  centriolar coiled-coil protein of 110 kDa isoform 1

    See identical proteins and their annotated locations for NP_892040.1

    Status: VALIDATED

    Source sequence(s)
    AC152412, BC053103, DV662471
    Consensus CDS
    CCDS21775.1
    UniProtKB/Swiss-Prot
    Q6A072, Q7TSH4
    Related
    ENSMUSP00000102167.2, ENSMUST00000106557.8
    Conserved Domains (1) summary
    pfam16025
    Location:29 → 131
    CALM_bind; Calcium-dependent calmodulin binding

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    118311740..118336247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017321910.2 → XP_017177399.1  centriolar coiled-coil protein of 110 kDa isoform X1

    UniProtKB/TrEMBL
    A0A140LJ44
    Conserved Domains (1) summary
    pfam16025
    Location:31 → 106
    CALM_bind; Calcium-dependent calmodulin binding

  2. XM_006507159.4 → XP_006507222.1  centriolar coiled-coil protein of 110 kDa isoform X2

    UniProtKB/TrEMBL
    A0A140LJ44
    Conserved Domains (1) summary
    pfam16025
    Location:31 → 106
    CALM_bind; Calcium-dependent calmodulin binding
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7TSH4.1 GenPept UniProtKB/Swiss-Prot:Q7TSH4

Gene LinkOut

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