U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC02802 long intergenic non-protein coding RNA 2802 [ Homo sapiens (human) ]

Gene ID: 100996732, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
LINC02802provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2802provided by HGNC
Primary source
HGNC:HGNC:54326
See related
Ensembl:ENSG00000232527 AllianceGenome:HGNC:54326
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in placenta (RPKM 2.6), spleen (RPKM 1.4) and 23 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
1q21.1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (144227030..144250352, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (143815799..143839063)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371206 Neighboring gene proton channel OTOP1-like Neighboring gene Sharpr-MPRA regulatory region 154 duplicate 2 Neighboring gene RNA, 5S ribosomal pseudogene 529 Neighboring gene D(1B) dopamine receptor-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Long Non-Coding RNA LINC02802 Regulates In Vitro Sprouting Angiogenesis by Sponging microRNA-486-5p. Rosano S, et al. Int J Mol Sci, 2022 Jan 31. PMID 35163581, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Long Non-Coding RNA LINC02802 Regulates In Vitro Sprouting Angiogenesis by Sponging microRNA-486-5p.
    Title: Long Non-Coding RNA LINC02802 Regulates In Vitro Sprouting Angiogenesis by Sponging microRNA-486-5p.
Submit: New GeneRIF Correction

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    144227030..144250352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_159162.6 RNA Sequence

    Related
    ENST00000452399.6

  2. XR_922021.4 RNA Sequence

  3. XR_922018.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    143815799..143839063
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_008486229.1 RNA Sequence

  2. XR_008486230.1 RNA Sequence

  3. XR_008486231.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases