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PRIM2BP primase 2B, pseudogene [ Homo sapiens (human) ]

Gene ID: 100996481, updated on 10-Oct-2023

Summary

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Official Symbol
PRIM2BPprovided by HGNC
Official Full Name
primase 2B, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:55759
See related
Ensembl:ENSG00000283453
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRIM2B
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Genomic context

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Location:
6q11.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (60281438..60545629)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (61453181..61713085)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene SUMO specific peptidase 6 pseudogene Neighboring gene RBBP4 pseudogene 4 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:58773583-58774340 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:58774341-58775097 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58775889-58776446 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58776447-58777002 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58777003-58777558 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58777559-58778114 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58778115-58778671 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58778672-58779227 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:58779228-58779784 Neighboring gene NANOG hESC enhancer GRCh37_chr6:57337645-57338146 Neighboring gene NANOG hESC enhancer GRCh37_chr6:57339131-57339632 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:57354999-57355730 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:57356812-57357419 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:57356203-57356811 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:57380456-57381014 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:57383839-57384752 Neighboring gene Sharpr-MPRA regulatory region 9523 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr6:57515883-57517082 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:57525190-57526389 Neighboring gene NANOG hESC enhancer GRCh37_chr6:57538278-57538779 Neighboring gene NANOG hESC enhancer GRCh37_chr6:57579775-57580276 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:57638823-57639671 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:57811262-57811857 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 41 Neighboring gene RBBP4 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Assignment of the 49-kDa (PRIM1) and 58-kDa (PRIM2A and PRIM2B) subunit genes of the human DNA primase to chromosome bands 1q44 and 6p11.1-p12. Shiratori A, et al. Genomics, 1995 Jul 20. PMID 8530050

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • DNA primase large subunit-like
  • DNA primase subunit 2 pseudogene
  • primase (DNA) subunit 2 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_034112.1 

    Range
    138..264329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    60281438..60545629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    61453181..61713085
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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