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LINC02361 long intergenic non-protein coding RNA 2361 [ Homo sapiens (human) ]

Gene ID: 100996246, updated on 8-Nov-2023

Summary

Official Symbol
LINC02361provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2361provided by HGNC
Primary source
HGNC:HGNC:53283
See related
Ensembl:ENSG00000256576 AllianceGenome:HGNC:53283
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in lymph node (RPKM 2.0), appendix (RPKM 1.4) and 22 other tissues See more
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Genomic context

See LINC02361 in Genome Data Viewer
Location:
12q24.33
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (132186735..132189695, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (132238044..132241004, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (132671280..132674240, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132626950-132627855 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5112 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5113 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7375 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132638821-132639321 Neighboring gene DEAD-box helicase 51 Neighboring gene nucleolar complex associated 4 homolog Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132662977-132663497 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5114 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5115 Neighboring gene uncharacterized LOC105370091 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 9 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132703817-132704677 Neighboring gene MS43a minisatellite repeat instability region Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr12:132831859-132832379 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132832380-132832899 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:132849568-132850462 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:132850463-132851355 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132852165-132852941 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:132854851-132855501 Neighboring gene GALNT9 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146452.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC138466
    Related
    ENST00000538731.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    132186735..132189695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160007.1 Reference GRCh38.p14 PATCHES

    Range
    93764..96724 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    132238044..132241004 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)