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CNOT4P1 CCR4-NOT transcription complex subunit 4 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100874389, updated on 10-Oct-2023

Summary

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Official Symbol
CNOT4P1provided by HGNC
Official Full Name
CCR4-NOT transcription complex subunit 4 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:39272
See related
Ensembl:ENSG00000236704 AllianceGenome:HGNC:39272
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q12.11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (20921664..20923233, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (20114781..20116348, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (21495803..21497372, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene EEF1A lysine methyltransferase 1 Neighboring gene RAN pseudogene 8 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7426 Neighboring gene exportin 4 Neighboring gene uncharacterized LOC124903129 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7427 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5158 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:21513739-21514238 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:21517633-21518209 Neighboring gene long intergenic non-protein coding RNA 367 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 30 Neighboring gene peptidylprolyl isomerase A pseudogene 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032240.2 

    Range
    101..1670
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    20921664..20923233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    20114781..20116348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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