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NAV2-AS2 NAV2 antisense RNA 2 [ Homo sapiens (human) ]

Gene ID: 100874014, updated on 10-Oct-2023

Summary

Official Symbol
NAV2-AS2provided by HGNC
Official Full Name
NAV2 antisense RNA 2provided by HGNC
Primary source
HGNC:HGNC:40743
See related
Ensembl:ENSG00000254453 AllianceGenome:HGNC:40743
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in heart (RPKM 17.8), thyroid (RPKM 6.2) and 19 other tissues See more
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Genomic context

See NAV2-AS2 in Genome Data Viewer
Location:
11p15.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (20043775..20049303, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (20164396..20169941, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (20065321..20070849, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene neuron navigator 2 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:20000027-20001226 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:20021347-20022216 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:20022217-20023085 Neighboring gene uncharacterized LOC124902644 Neighboring gene NAV2 antisense RNA 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:20046732-20047316 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:20048270-20048921 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:20048922-20049572 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:20070019-20071218 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:20086241-20087043 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:20133119-20134018 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:20134019-20134918 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:20135723-20136224 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:20136225-20136724 Neighboring gene uncharacterized LOC107984418 Neighboring gene uncharacterized LOC124902643 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:20177816-20179015 Neighboring gene developing brain homeobox 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046672.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC015684
    Related
    ENST00000533767.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    20043775..20049303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    20164396..20169941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)