U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FGF12-AS3 FGF12 antisense RNA 3 [ Homo sapiens (human) ]

Gene ID: 100873988, updated on 26-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
FGF12-AS3provided by HGNC
Official Full Name
FGF12 antisense RNA 3provided by HGNC
Primary source
HGNC:HGNC:40236
See related
Ensembl:ENSG00000226709 AllianceGenome:HGNC:40236
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See FGF12-AS3 in Genome Data Viewer
Location:
3q28
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (192516831..192521398)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (195212718..195217285)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 12 Neighboring gene FGF12 antisense RNA 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_67460 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:192134687-192135404 Neighboring gene Sharpr-MPRA regulatory region 7499 Neighboring gene Sharpr-MPRA regulatory region 196 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:192233174-192234373 Neighboring gene small nucleolar RNA U13 Neighboring gene FGF12 antisense RNA 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20991 Neighboring gene uncharacterized LOC124906319

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See Variation Viewer (GRCh38)

Genotypes

General gene information

Go to the top of the page Help

Other Names

  • FGF12 antisense RNA 3 (non-protein coding)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_185499.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC026671
    Related
    ENST00000452848.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    192516831..192521398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    195212718..195217285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases