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RNY3P5 RNY3 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 100873809, updated on 10-Oct-2023

Summary

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Official Symbol
RNY3P5provided by HGNC
Official Full Name
RNY3 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:42489
See related
AllianceGenome:HGNC:42489
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q21.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (60789460..60789761)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (60009577..60009878)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (61363594..61363895)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr13:61211939-61212099 Neighboring gene eukaryotic translation initiation factor 4A1 pseudogene 6 Neighboring gene long intergenic non-protein coding RNA 378 Neighboring gene meiotic recombination hotspot P Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:61270524-61271060 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr13:61283822-61284322 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr13:61284323-61284823 Neighboring gene Sharpr-MPRA regulatory region 6777 Neighboring gene RNY4 pseudogene 31 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:61455386-61456062 Neighboring gene long intergenic non-protein coding RNA 1442

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, Ro-associated Y3 pseudogene 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032594.2 

    Range
    101..402
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    60789460..60789761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    60009577..60009878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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