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RNU6-83P RNA, U6 small nuclear 83, pseudogene [ Homo sapiens (human) ]

Gene ID: 100873782, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-83Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 83, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:42573
See related
Ensembl:ENSG00000207298 AllianceGenome:HGNC:42573
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RNU6-83
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Genomic context

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Location:
13q32.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (99025234..99025345)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (98235038..98235149)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (99677488..99677599)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene dedicator of cytokinesis 9 Neighboring gene DOCK9 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7922 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7923 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr13:99553940-99555139 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:99582088-99582640 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:99582641-99583193 Neighboring gene RPL7L1 pseudogene 12 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr13:99644283-99645482 Neighboring gene NANOG hESC enhancer GRCh37_chr13:99646324-99646825 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr13:99719017-99720216 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7924 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7925 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5462 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:99738979-99739540 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5465 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:99740103-99740662 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:99752082-99752247 Neighboring gene DOCK9 divergent transcript Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7926 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7927 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5466 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5467 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_33558 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr13:99811198-99812397 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:99824919-99825420 Neighboring gene ribosomal protein S6 pseudogene 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043357.1 

    Range
    101..212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    99025234..99025345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    98235038..98235149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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