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RNU6-53P RNA, U6 small nuclear 53, pseudogene [ Homo sapiens (human) ]

Gene ID: 100873762, updated on 10-Oct-2023

Summary

Official Symbol
RNU6-53Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 53, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:42543
See related
Ensembl:ENSG00000202237 AllianceGenome:HGNC:42543
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RNU6-53
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Genomic context

Location:
13q12.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (28703702..28703807, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (27926990..27927095, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (29277839..29277944, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4A1 pseudogene 7 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7517 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5217 Neighboring gene proteasome maturation protein Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:29267612-29268144 Neighboring gene uncharacterized LOC124903143 Neighboring gene solute carrier family 46 member 3 Neighboring gene cytochrome P450 family 51 subfamily A member 1 pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5218 Neighboring gene Sharpr-MPRA regulatory region 8918 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr13:29327481-29328226 Neighboring gene POM121 transmembrane nucleoporin like 13, pseudogene

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study identifies variants associated with histologic features of nonalcoholic Fatty liver disease.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043181.1 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    28703702..28703807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    27926990..27927095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)