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RNA5SP436 RNA, 5S ribosomal pseudogene 436 [ Homo sapiens (human) ]

Gene ID: 100873685, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP436provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 436provided by HGNC
Primary source
HGNC:HGNC:43336
See related
Ensembl:ENSG00000251829 AllianceGenome:HGNC:43336
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S436
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Genomic context

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See RNA5SP436 in Genome Data Viewer
Location:
17p12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (15782341..15782455)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (15688711..15688825)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (15685655..15685769)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene CDRT15 pseudogene 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:15672089-15672589 Neighboring gene zinc finger SWIM-type containing 5 pseudogene 1 Neighboring gene interleukin 6 signal transducer pseudogene 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:15689807-15690306 Neighboring gene Meis homeobox 3 pseudogene 1 Neighboring gene uncharacterized LOC124903935

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 436

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033642.1 

    Range
    101..215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    15782341..15782455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    15688711..15688825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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