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RNA5SP305 RNA, 5S ribosomal pseudogene 305 [ Homo sapiens (human) ]

Gene ID: 100873579, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP305provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 305provided by HGNC
Primary source
HGNC:HGNC:43205
See related
Ensembl:ENSG00000199535 AllianceGenome:HGNC:43205
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S305
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Genomic context

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See RNA5SP305 in Genome Data Viewer
Location:
10p12.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (24640166..24640284)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (24658962..24659080)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (24929095..24929213)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene KIAA1217 Neighboring gene uncharacterized LOC105376455 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:24751397-24751898 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_11630 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:24782535-24783036 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:24783037-24783536 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr10:24783692-24784472 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:24790381-24790881 Neighboring gene uncharacterized LOC124902394 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:24821078-24822277 Neighboring gene Sharpr-MPRA regulatory region 10635 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:24847550-24847997 Neighboring gene NANOG hESC enhancer GRCh37_chr10:24868778-24869279 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:24901387-24901576 Neighboring gene Rho GTPase activating protein 21 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2222 Neighboring gene coenzyme Q10B pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2223 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2224 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:25012349-25013259 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2228 Neighboring gene uncharacterized LOC105376456 Neighboring gene MPRA-validated peak910 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:25051766-25052318

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 305

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033451.1 

    Range
    101..219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    24640166..24640284
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    24658962..24659080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases