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RNA5SP518 RNA, 5S ribosomal pseudogene 518 [ Homo sapiens (human) ]

Gene ID: 100873569, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP518provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 518provided by HGNC
Primary source
HGNC:HGNC:43418
See related
Ensembl:ENSG00000251766 AllianceGenome:HGNC:43418
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S518
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Genomic context

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Location:
Yp11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (10090410..10090528, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (10409527..10409645, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (9928019..9928137, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein Y-linked family 2 member Q, pseudogene Neighboring gene testis specific protein Y-linked 20, pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:9908937-9909527 Neighboring gene testis specific protein Y-linked 5, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chrY:9920919-9921420 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:9923678-9924274 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:9924275-9924871 Neighboring gene RNA, 5S ribosomal pseudogene 519 Neighboring gene NANOG hESC enhancer GRCh37_chrY:9953369-9953870 Neighboring gene mitochondrial ribosomal protein L57 pseudogene 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 518

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033430.1 

    Range
    101..219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    10090410..10090528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    10409527..10409645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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