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RNA5SP288 RNA, 5S ribosomal pseudogene 288 [ Homo sapiens (human) ]

Gene ID: 100873541, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP288provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 288provided by HGNC
Primary source
HGNC:HGNC:43188
See related
Ensembl:ENSG00000251884 AllianceGenome:HGNC:43188
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S288
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Genomic context

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Location:
9q22.32
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (95142449..95142541, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (107311857..107311949, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (97904731..97904823, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene aminopeptidase O (putative) Neighboring gene uncharacterized LOC107987102 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20063 Neighboring gene Sharpr-MPRA regulatory region 10736 Neighboring gene Sharpr-MPRA regulatory region 8238 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:97894463-97894965 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:97900452-97901082 Neighboring gene FA complementation group C Neighboring gene ribosomal protein S26 pseudogene 37 Neighboring gene small nucleolar RNA U13 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_110513 Neighboring gene Sharpr-MPRA regulatory region 1665 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_110548 Neighboring gene Sharpr-MPRA regulatory region 1693 Neighboring gene ATM interactor pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 288

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033374.1 

    Range
    101..193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    95142449..95142541 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    107311857..107311949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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