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RNA5SP284 RNA, 5S ribosomal pseudogene 284 [ Homo sapiens (human) ]

Gene ID: 100873537, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP284provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 284provided by HGNC
Primary source
HGNC:HGNC:43184
See related
Ensembl:ENSG00000207277 AllianceGenome:HGNC:43184
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S284
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Genomic context

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Location:
9q13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (63813190..63813307)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (47742377..47742494, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (68408924..68409041)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene prostaglandin E receptor 4 pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:68377249-68377750 Neighboring gene translation initiation factor IF-2-like Neighboring gene H3K4me1 hESC enhancers GRCh37_chr9:68379895-68380396 and GRCh37_chr9:68380397-68380896 Neighboring gene NANOG hESC enhancer GRCh37_chr9:68401403-68401904 Neighboring gene OCT4 hESC enhancer GRCh37_chr9:68404885-68405386 Neighboring gene long intergenic non-protein coding RNA 537 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:68410724-68411252 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:68411253-68411781 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:68413366-68413904 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:68413905-68414441 Neighboring gene double homeobox 4 like 50 (pseudogene) Neighboring gene microRNA 4477b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 284

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033366.1 

    Range
    101..218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    63813190..63813307
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    47742377..47742494 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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