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RNA5SP272 RNA, 5S ribosomal pseudogene 272 [ Homo sapiens (human) ]

Gene ID: 100873525, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP272provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 272provided by HGNC
Primary source
HGNC:HGNC:43172
See related
Ensembl:ENSG00000251904 AllianceGenome:HGNC:43172
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S272
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Genomic context

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Location:
8q21.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (88396437..88396547, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (89519371..89519481, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (89408666..89408776, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375628 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:89100426-89101134 Neighboring gene matrix metallopeptidase 16 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:89161441-89162125 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:89310134-89311333 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:89314920-89315534 Neighboring gene uncharacterized LOC105375630 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:89471701-89472542 Neighboring gene uncharacterized LOC105375629 Neighboring gene RLIG1 pseudogene 3 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:89577879-89578497 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:89604229-89604834 Neighboring gene uncharacterized LOC124901973

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 272

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033345.1 

    Range
    101..211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    88396437..88396547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    89519371..89519481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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