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RNA5SP208 RNA, 5S ribosomal pseudogene 208 [ Homo sapiens (human) ]

Gene ID: 100873468, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP208provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 208provided by HGNC
Primary source
HGNC:HGNC:43108
See related
Ensembl:ENSG00000251965 AllianceGenome:HGNC:43108
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S208
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Genomic context

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Location:
6q12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (67467231..67467308, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (68623949..68624026, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (68177124..68177201, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377843 Neighboring gene uncharacterized LOC105377842 Neighboring gene MPRA-validated peak5869 silencer Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:68055308-68056507 Neighboring gene SH3 domain binding protein 4 pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94210 Neighboring gene RNA, U6 small nuclear 280, pseudogene Neighboring gene MPRA-validated peak5873 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:68531597-68532796 Neighboring gene Sharpr-MPRA regulatory region 5869 Neighboring gene uncharacterized LOC105377845 Neighboring gene uncharacterized LOC107986610

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 208

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033719.1 

    Range
    101..178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    67467231..67467308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    68623949..68624026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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