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RNA5SP144 RNA, 5S ribosomal pseudogene 144 [ Homo sapiens (human) ]

Gene ID: 100873411, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP144provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 144provided by HGNC
Primary source
HGNC:HGNC:43044
See related
Ensembl:ENSG00000222778 AllianceGenome:HGNC:43044
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S144
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Genomic context

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Location:
3q24
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (144186905..144187020, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (146933537..146933652, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (143905747..143905862, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein S17 pseudogene 10 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20660 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:143689971-143690551 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:143690552-143691132 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14800 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20663 Neighboring gene divergent protein kinase domain 2A Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20664 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20665 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:143856144-143856657 Neighboring gene uncharacterized LOC105374140 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20666 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20667 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20668 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20669 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20670 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:144156282-144157481 Neighboring gene uncharacterized LOC124909444

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 144

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033605.1 

    Range
    101..216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    144186905..144187020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    146933537..146933652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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