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RNA5SP143 RNA, 5S ribosomal pseudogene 143 [ Homo sapiens (human) ]

Gene ID: 100873410, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP143provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 143provided by HGNC
Primary source
HGNC:HGNC:43043
See related
Ensembl:ENSG00000252745 AllianceGenome:HGNC:43043
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S143
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Genomic context

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Location:
3q23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (142591677..142591791, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (145338937..145339051, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (142310519..142310633, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATR serine/threonine kinase Neighboring gene SUCLG2 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20643 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20644 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20645 Neighboring gene ribosomal protein L6 pseudogene 9 Neighboring gene PLS1 antisense RNA 1 Neighboring gene plastin 1 Neighboring gene RN7SK pseudogene 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 143

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033603.1 

    Range
    101..215
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    142591677..142591791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    145338937..145339051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases