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RNA5SP37 RNA, 5S ribosomal pseudogene 37 [ Homo sapiens (human) ]

Gene ID: 100873369, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP37provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 37provided by HGNC
Primary source
HGNC:HGNC:42613
See related
Ensembl:ENSG00000202290 AllianceGenome:HGNC:42613
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S37
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Genomic context

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Location:
13q32.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (97362972..97363101, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (96569280..96569409, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (98015226..98015355, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene muscleblind like splicing regulator 2 Neighboring gene uncharacterized LOC107984573 Neighboring gene uncharacterized LOC101927385 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7888 Neighboring gene Sharpr-MPRA regulatory region 6469 Neighboring gene FOXA motif-containing MPRA enhancer 219 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5450 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:98085607-98086538 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5452 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:98090451-98090644 Neighboring gene NANOG hESC enhancer GRCh37_chr13:98101035-98101536 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7892 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7893 Neighboring gene RAP2A, member of RAS oncogene family Neighboring gene proteasome subunit alpha 6 pseudogene 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 37

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033520.1 

    Range
    101..230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    97362972..97363101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    96569280..96569409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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