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RNA5SP36 RNA, 5S ribosomal pseudogene 36 [ Homo sapiens (human) ]

Gene ID: 100873368, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP36provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 36provided by HGNC
Primary source
HGNC:HGNC:42612
See related
Ensembl:ENSG00000222129 AllianceGenome:HGNC:42612
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S36
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Genomic context

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Location:
13q32.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (94651397..94651529, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (93854906..93855038, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (95303651..95303783, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene TDP-glucose 4,6-dehydratase Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7866 Neighboring gene Sharpr-MPRA regulatory region 4462 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:95256499-95256998 Neighboring gene G protein-coupled receptor 180 Neighboring gene NADH:ubiquinone oxidoreductase subunit A3 pseudogene 5 Neighboring gene NANOG hESC enhancer GRCh37_chr13:95313022-95313523 Neighboring gene VISTA enhancer hs796 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:95353695-95354372 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:95354373-95355048 Neighboring gene long intergenic non-protein coding RNA 391 Neighboring gene RNA, 7SL, cytoplasmic 585, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:95357234-95357738 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:95357739-95358243 Neighboring gene VISTA enhancer hs488 Neighboring gene SRY-box transcription factor 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 36

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033518.1 

    Range
    101..233
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    94651397..94651529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    93854906..93855038 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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