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MTND5P15 MT-ND5 pseudogene 15 [ Homo sapiens (human) ]

Gene ID: 100873259, updated on 10-Oct-2023

Summary

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Official Symbol
MTND5P15provided by HGNC
Official Full Name
MT-ND5 pseudogene 15provided by HGNC
Primary source
HGNC:HGNC:42277
See related
AllianceGenome:HGNC:42277
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3q26.32
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (177010419..177011046, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (179813415..179814042, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (176728207..176728834, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:176484349-176485548 Neighboring gene RNA, 5S ribosomal pseudogene 147 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:176544827-176545328 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:176545329-176545828 Neighboring gene long intergenic non-protein coding RNA 1209 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:176755168-176756367 Neighboring gene Sharpr-MPRA regulatory region 5683 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:176759414-176759658 Neighboring gene TBL1XR1 antisense RNA 1 Neighboring gene TBL1X/Y related 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20835 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20836 Neighboring gene RNA, U6 small nuclear 681, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 15

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032490.1 

    Range
    101..728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    177010419..177011046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    179813415..179814042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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