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MTND1P19 MT-ND1 pseudogene 19 [ Homo sapiens (human) ]

Gene ID: 100873220, updated on 10-Oct-2023

Summary

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Official Symbol
MTND1P19provided by HGNC
Official Full Name
MT-ND1 pseudogene 19provided by HGNC
Primary source
HGNC:HGNC:42094
See related
Ensembl:ENSG00000251449 AllianceGenome:HGNC:42094
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (92702345..92702635)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (96030070..96030360)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (93623496..93623786)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:93104511-93105710 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:93192087-93192994 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:93193903-93194810 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:93194811-93195716 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:93197533-93198440 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:93198441-93199346 Neighboring gene PMPCA pseudogene 1 Neighboring gene Sharpr-MPRA regulatory region 6143 Neighboring gene lncRNA p53 regulated and ESC associated 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:93353264-93354196 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:93354197-93355129 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:93358086-93358597 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:93359794-93360688 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:93360689-93361582 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:93365158-93366051 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:93361583-93362476 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:93366052-93366944 Neighboring gene glutamate ionotropic receptor delta type subunit 2 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:93440900-93441601 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:93441602-93442302 Neighboring gene RACK1 pseudogene 3 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:94068335-94068896 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21726 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:94287122-94287935 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:94329999-94330773 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:94506413-94507612 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:94564478-94565145 Neighboring gene Sharpr-MPRA regulatory region 1337 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21727 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21728 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15573 Neighboring gene RNA, 5S ribosomal pseudogene 164

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 19

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032412.1 

    Range
    101..391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    92702345..92702635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    96030070..96030360
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases