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MTCO1P3 MT-CO1 pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 100873205, updated on 10-Oct-2023

Summary

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Official Symbol
MTCO1P3provided by HGNC
Official Full Name
MT-CO1 pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:39604
See related
Ensembl:ENSG00000228930 AllianceGenome:HGNC:39604
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
21q22.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (45376191..45376382, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (43742061..43742252, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (46796106..46796297, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:46766854-46767770 Neighboring gene uncharacterized LOC105372839 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:46773249-46774123 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:46777975-46778628 Neighboring gene CRISPRi-validated cis-regulatory element chr21.1536 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:46782348-46783073 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr21:46783494-46784693 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr21:46785000-46786199 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:46786885-46787636 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:46787637-46788388 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:46790350-46790860 Neighboring gene uncharacterized LOC124905041 Neighboring gene ReSE screen-validated silencer GRCh37_chr21:46796710-46796898 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:46799692-46800692 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:46800693-46801692 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:46808325-46809136 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr21:46812138-46812638 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:46824235-46824935 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:46827875-46828666 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr21:46828667-46829459 Neighboring gene COL18A1 antisense RNA 2 Neighboring gene collagen type XVIII alpha 1 chain Neighboring gene breast cancer associated ESR1 regulating natural antisense transcript 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • MTCO1 pseudogene 3
  • mitochondrially encoded cytochrome c oxidase I pseudogene 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032327.1 

    Range
    101..292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    45376191..45376382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060945.1 Alternate T2T-CHM13v2.0

    Range
    43742061..43742252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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