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UFL1-AS1 UFL1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100861530, updated on 10-Oct-2023

Summary

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Official Symbol
UFL1-AS1provided by HGNC
Official Full Name
UFL1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:41007
See related
AllianceGenome:HGNC:41007
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See UFL1-AS1 in Genome Data Viewer
Location:
6q16.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (96200343..96521714, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (97372530..97693627, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986626 Neighboring gene keratin 18 pseudogene 50 Neighboring gene uncharacterized LOC105377905 Neighboring gene fucosyltransferase 9 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24840 Neighboring gene RNA, 7SL, cytoplasmic 797, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24841 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:96967525-96968398 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:96968399-96969270 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:96969271-96970142 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:96970143-96971014 Neighboring gene UFM1 specific ligase 1 Neighboring gene four and a half LIM domains 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

General gene information

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Other Names

  • UFL1 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    96200343..96521714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007059687.1 RNA Sequence

  2. XR_002956362.2 RNA Sequence

  3. XR_007059685.1 RNA Sequence

  4. XR_007059683.1 RNA Sequence

  5. XR_007059686.1 RNA Sequence

  6. XR_007059684.1 RNA Sequence

  7. XR_001744265.3 RNA Sequence

  8. XR_007059682.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    97372530..97693627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007076984.1 RNA Sequence

  2. XR_007076985.1 RNA Sequence

  3. XR_007076981.1 RNA Sequence

  4. XR_007076983.1 RNA Sequence

  5. XR_007076982.1 RNA Sequence

Nucleotide Protein
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