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Mir378b microRNA 378b [ Mus musculus (house mouse) ]

Gene ID: 100628571, updated on 8-Feb-2024

Summary

Official Symbol
Mir378bprovided by MGI
Official Full Name
microRNA 378bprovided by MGI
Primary source
MGI:MGI:4950393
See related
Ensembl:ENSMUSG00000092985 miRBase:MI0016973; AllianceGenome:MGI:4950393
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mir-378b; mmu-mir-378b
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
11 C; 11 52.4 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (88243599..88243690)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (88352773..88352864)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene VISTA enhancer mm439 Neighboring gene predicted gene, 34366 Neighboring gene coiled-coil domain containing 182 Neighboring gene musashi RNA-binding protein 2 Neighboring gene STARR-seq mESC enhancer starr_30328 Neighboring gene predicted gene 11510 Neighboring gene STARR-seq mESC enhancer starr_30343 Neighboring gene STARR-positive B cell enhancer ABC_E10704 Neighboring gene RIKEN cDNA 0610039H22 gene Neighboring gene STARR-positive B cell enhancer mm9_chr11:88476068-88476369 Neighboring gene STARR-positive B cell enhancer ABC_E735

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039545.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL732539
    Related
    ENSMUST00000175244.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    88243599..88243690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)