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MIR4535 microRNA 4535 [ Homo sapiens (human) ]

Gene ID: 100616415, updated on 10-Oct-2023

Summary

Official Symbol
MIR4535provided by HGNC
Official Full Name
microRNA 4535provided by HGNC
Primary source
HGNC:HGNC:41629
See related
Ensembl:ENSG00000266887 miRBase:MI0016903; AllianceGenome:HGNC:41629
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
22q13.32
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (48780295..48780353)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (49275083..49275141)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (49176107..49176165)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene TAFA chemokine like family member 5 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48943879-48944378 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:48953988-48954215 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48955380-48956268 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48956269-48957157 Neighboring gene uncharacterized LOC284933 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48972958-48973464 Neighboring gene uncharacterized LOC124900480 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49001381-49002302 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49024390-49025219 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49025220-49026048 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49026049-49026878 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49030484-49031058 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49031059-49031631 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49036799-49037318 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:49043107-49043284 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49062165-49062666 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49062667-49063166 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49064778-49065430 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63485 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63487 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49096987-49097494 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49097495-49098002 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49107619-49108118 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49113659-49114248 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49114249-49114838 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:49191875-49192796 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49232881-49233408 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49252199-49252698 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49264603-49265104 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49265105-49265604 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49267795-49268295 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63550 Neighboring gene long intergenic non-protein coding RNA 1310 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49298268-49298768 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49315147-49315667 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63573 Neighboring gene MPRA-validated peak4515 silencer Neighboring gene Sharpr-MPRA regulatory region 10948 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49355769-49356614 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49411058-49411949 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49414603-49415102 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49416620-49417120 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49417121-49417621 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr22:49430339-49431262 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:49444419-49444575 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19277 Neighboring gene neuronal hypoxia inducible, placenta associated

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039761.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    Z83855
    Related
    ENST00000580946.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    48780295..48780353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    49275083..49275141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)