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MIR4477B microRNA 4477b [ Homo sapiens (human) ]

Gene ID: 100616194, updated on 10-Oct-2023

Summary

Official Symbol
MIR4477Bprovided by HGNC
Official Full Name
microRNA 4477bprovided by HGNC
Primary source
HGNC:HGNC:41898
See related
Ensembl:ENSG00000266017 miRBase:MI0016830; AllianceGenome:HGNC:41898
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR4477B in Genome Data Viewer
Location:
9q13
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (63819574..63819654)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (47736028..47736108, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (68415308..68415388)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:68410724-68411252 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:68411253-68411781 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:68413366-68413904 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:68413905-68414441 Neighboring gene RNA, 5S ribosomal pseudogene 284 Neighboring gene long intergenic non-protein coding RNA 537 Neighboring gene NANOG hESC enhancer GRCh37_chr9:68420179-68420680 Neighboring gene Sharpr-MPRA regulatory region 9804 Neighboring gene Sharpr-MPRA regulatory region 11770 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:68424461-68425069 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr9:68425679-68426286 Neighboring gene double homeobox 4 like 50 (pseudogene) Neighboring gene FSHD region gene 1 family member J, pseudogene Neighboring gene MPRA-validated peak7254 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:68468609-68469276 Neighboring gene COBW domain containing 3 pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039689.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    CR786580
    Related
    ENST00000581659.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    63819574..63819654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    47736028..47736108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)