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MIR378D2 microRNA 378d-2 [ Homo sapiens (human) ]

Gene ID: 100616169, updated on 10-Oct-2023

Summary

Official Symbol
MIR378D2provided by HGNC
Official Full Name
microRNA 378d-2provided by HGNC
Primary source
HGNC:HGNC:41797
See related
Ensembl:ENSG00000284288 miRBase:MI0003840; AllianceGenome:HGNC:41797
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
mir-378d-2
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
8q22.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (93916022..93916119, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (95041107..95041204, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (94928250..94928347, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene transmembrane protein 67 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:94791793-94792322 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:94792323-94792851 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:94858379-94859578 Neighboring gene MYL12A pseudogene 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:94886986-94887486 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:94887487-94887987 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:94892037-94893236 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27620 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19360 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19361 Neighboring gene MIR378D2 host gene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19362 Neighboring gene pyruvate dehydrogenase phosphatase catalytic subunit 1 Neighboring gene proteasome subunit alpha 2 pseudogene 2

Genomic regions, transcripts, and products

Bibliography

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039602.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC084346
    Related
    ENST00000580636.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    93916022..93916119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    95041107..95041204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)