U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PPP1R14BP3 protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 3 [ Homo sapiens (human) ]

Gene ID: 100507617, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
PPP1R14BP3provided by HGNC
Official Full Name
protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 3provided by HGNC
Primary source
HGNC:HGNC:16330
See related
AllianceGenome:HGNC:16330
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
4q31.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (139114733..139115539, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (142434361..142435167, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (140035887..140036693, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 531, pseudogene Neighboring gene E74 like ETS transcription factor 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21918 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15694 Neighboring gene Sharpr-MPRA regulatory region 15356 Neighboring gene RNA, 7SL, cytoplasmic 382, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:140073148-140073731 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:140076063-140076645 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:140076646-140077228 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:140080143-140080726 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:140080727-140081308 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:140083181-140083798 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:140084443-140085075 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:140085076-140085707 Neighboring gene uncharacterized LOC105379412 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21919 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15696 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15697 Neighboring gene CRISPRi-validated cis-regulatory element chr4.2840 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15698 Neighboring gene RNA, 7SL, cytoplasmic 311, pseudogene Neighboring gene RNA, U6 small nuclear 506, pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Regulator-driven functional diversification of protein phosphatase-1 in eukaryotic evolution. Ceulemans H, et al. Bioessays, 2002 Apr. PMID 11948623
  2. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. Choudhury NR, et al. BMC Biol, 2017 Nov 8. PMID 29117863, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_030217.2 

    Range
    25..831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    139114733..139115539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    142434361..142435167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases