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UVRAG-DT UVRAG divergent transcript [ Homo sapiens (human) ]

Gene ID: 100506113, updated on 10-Oct-2023

Summary

Official Symbol
UVRAG-DTprovided by HGNC
Official Full Name
UVRAG divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:53952
See related
Ensembl:ENSG00000255507 AllianceGenome:HGNC:53952
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 2.9), fat (RPKM 1.7) and 2 other tissues See more
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Genomic context

Location:
11q13.5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (75813514..75814797, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (75743238..75744521, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (75524559..75525842, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5275 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:75479126-75479626 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3774 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3775 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5276 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5277 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:75487905-75488193 Neighboring gene DGAT2 divergent transcript Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:75492457-75493023 Neighboring gene Sharpr-MPRA regulatory region 10576 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3776 Neighboring gene diacylglycerol O-acyltransferase 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5278 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:75524366-75525565 Neighboring gene Sharpr-MPRA regulatory region 8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3777 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5280 Neighboring gene UV radiation resistance associated Neighboring gene Sharpr-MPRA regulatory region 15578 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:75584619-75585120 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5281 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 1A pseudogene 1 Neighboring gene RNA, 5S ribosomal pseudogene 344

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_144531.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA432009, AI208831, DB022010
    Related
    ENST00000531263.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    75813514..75814797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    75743238..75744521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)