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Gm20324 predicted gene, 20324 [ Mus musculus (house mouse) ]

Gene ID: 100504637, updated on 8-Feb-2024

Summary

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Official Symbol
Gm20324provided by MGI
Official Full Name
predicted gene, 20324provided by MGI
Primary source
MGI:MGI:5012509
See related
Ensembl:ENSMUSG00000100199 AllianceGenome:MGI:5012509
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in thymus adult (RPKM 10.4), spleen adult (RPKM 7.0) and 21 other tissues See more
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Genomic context

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Location:
15 E1; 15 38.76 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (82783281..82790017)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (82899080..82905816)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 2, subfamily d, polypeptide 26 Neighboring gene transcription factor 20 Neighboring gene STARR-positive B cell enhancer ABC_E9917 Neighboring gene STARR-seq mESC enhancer starr_39304 Neighboring gene transforming growth factor beta regulated gene 3 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:82744980-82745163 Neighboring gene microRNA 3080 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:82805127-82805236 Neighboring gene STARR-positive B cell enhancer mm9_chr15:82818187-82818488 Neighboring gene expressed sequence AW121686

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
  3. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045068.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC129563
    Related
    ENSMUST00000186291.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    82783281..82790017
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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