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Kcnmb4os2 potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 2 [ Mus musculus (house mouse) ]

Gene ID: 100504412, updated on 8-Feb-2024

Summary

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Official Symbol
Kcnmb4os2provided by MGI
Official Full Name
potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 2provided by MGI
Primary source
MGI:MGI:1918263
See related
Ensembl:ENSMUSG00000085837 AllianceGenome:MGI:1918263
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4933400F03Rik
Expression
Biased expression in testis adult (RPKM 27.3), thymus adult (RPKM 13.7) and 12 other tissues See more
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Genomic context

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See Kcnmb4os2 in Genome Data Viewer
Location:
10 D2; 10 64.76 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (116309068..116310892)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (116473163..116474987)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1 Neighboring gene STARR-seq mESC enhancer starr_27956 Neighboring gene potassium large conductance calcium-activated channel, subfamily M, beta member 4 Neighboring gene predicted gene, 53634 Neighboring gene STARR-positive B cell enhancer ABC_E2965 Neighboring gene CCR4-NOT transcription complex, subunit 2 Neighboring gene STARR-positive B cell enhancer ABC_E5184 Neighboring gene STARR-seq mESC enhancer starr_27957 Neighboring gene predicted gene, 31593 Neighboring gene STARR-positive B cell enhancer ABC_E6924 Neighboring gene STARR-seq mESC enhancer starr_27959 Neighboring gene STARR-positive B cell enhancer mm9_chr10:116001983-116002283 Neighboring gene STARR-positive B cell enhancer ABC_E9805 Neighboring gene RIKEN cDNA 5330438D12 gene Neighboring gene STARR-positive B cell enhancer ABC_E6925

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • Kcnmb4 opposite strand transcript 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_130644.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC139376, AK016591, BF472784
    Related
    ENSMUST00000144020.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    116309068..116310892
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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