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Gm20005 predicted gene, 20005 [ Mus musculus (house mouse) ]

Gene ID: 100503999, updated on 8-Feb-2024

Summary

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Official Symbol
Gm20005provided by MGI
Official Full Name
predicted gene, 20005provided by MGI
Primary source
MGI:MGI:5012190
See related
AllianceGenome:MGI:5012190
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm43153; Gm45954
Expression
Biased expression in testis adult (RPKM 2.8), CNS E11.5 (RPKM 0.3) and 7 other tissues See more
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Genomic context

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Location:
5 G3; 5 89.18 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (149562197..149571252)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (149641222..149647792)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene 15997 Neighboring gene WD40 repeat domain 95 Neighboring gene predicted gene, 54316 Neighboring gene STARR-seq mESC enhancer starr_14938 Neighboring gene predicted gene, 35763 Neighboring gene STARR-positive B cell enhancer ABC_E3638 Neighboring gene STARR-positive B cell enhancer ABC_E1317 Neighboring gene heat shock 105kDa/110kDa protein 1 Neighboring gene STARR-seq mESC enhancer starr_14940 Neighboring gene NME/NM23 nucleoside diphosphate kinase, pseudogene 1 Neighboring gene beta-3-glucosyltransferase Neighboring gene STARR-seq mESC enhancer starr_14941 Neighboring gene predicted gene, 36141

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    149562197..149571252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942704.1 RNA Sequence

  2. XR_001785032.2 RNA Sequence

Nucleotide Protein Strain
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