Speer4e2 spermatogenesis associated glutamate (E)-rich protein 4E2 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Speer4e2provided by MGI
Official Full Name: spermatogenesis associated glutamate (E)-rich protein 4E2provided by MGI
Primary source: MGI:MGI:3809109
See related: Ensembl:ENSMUSG00000072188 AllianceGenome:MGI:3809109
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Gm10354
Expression: Biased expression in testis adult (RPKM 10.5) and ovary adult (RPKM 0.6) See more
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Genomic context

Location:: 5 A2; 5 6.48 cM

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	5	NC_000071.7 (15024158..15028969, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	5	NC_000071.6 (14974144..14978955, complement)

Chromosome 5 - NC_000071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: spermatogenesis associated glutamate (E)-rich protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001281514.1 → NP_001268443.1 spermatogenesis associated glutamate (E)-rich protein-like

Status: VALIDATED

Source sequence(s)

AC144480, CJ042498

Consensus CDS

CCDS59668.1

UniProtKB/TrEMBL

K7N6A0, Q8C5Y0

Related

ENSMUSP00000094716.5, ENSMUST00000096953.5

Conserved Domains (1) summary

pfam04822
Location:52 → 133

Takusan; Takusan

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000071.7 Reference GRCm39 C57BL/6J

Range

15024158..15028969 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_006503517.4 → XP_006503580.1 spermatogenesis associated glutamate (E)-rich protein-like isoform X1

Conserved Domains (1) summary

pfam04822
Location:50 → 128

Takusan