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Gm19585 predicted gene, 19585 [ Mus musculus (house mouse) ]

Gene ID: 100503190, updated on 8-Feb-2024

Summary

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Official Symbol
Gm19585provided by MGI
Official Full Name
predicted gene, 19585provided by MGI
Primary source
MGI:MGI:5011770
See related
Ensembl:ENSMUSG00000100150 AllianceGenome:MGI:5011770
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
17 C; 17 27.26 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (52456317..52470514)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (52149289..52163486)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr17:52043120-52043421 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:52043404-52043557 Neighboring gene predicted gene, 20098 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:52095713-52095914 Neighboring gene STARR-positive B cell enhancer mm9_chr17:52138472-52138772 Neighboring gene FCF1 small subunit processome component homolog pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E5619 Neighboring gene STARR-positive B cell enhancer ABC_E9959 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:52322274-52322383 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:52356867-52357020 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:52421626-52421900 Neighboring gene STARR-seq mESC enhancer starr_42815 Neighboring gene predicted gene, 41600 Neighboring gene predicted gene 5094

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_155494.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA163990, CT010587
    Related
    ENSMUST00000241039.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    52456317..52470514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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