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B3GNT2P1 B3GNT2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100422469, updated on 10-Oct-2023

Summary

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Official Symbol
B3GNT2P1provided by HGNC
Official Full Name
B3GNT2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:51316
See related
AllianceGenome:HGNC:51316
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See B3GNT2P1 in Genome Data Viewer
Location:
Xq22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (99886625..99888106, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (98328879..98330363, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (99141623..99143104, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene TEX101 pseudogene 1 Neighboring gene NANOG hESC enhancer GRCh37_chrX:99004673-99005174 Neighboring gene X-ray repair cross complementing 6 pseudogene 5 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:99090809-99091310 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:99194631-99195245 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:99325109-99326054 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:99389825-99390366 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:99390367-99390907 Neighboring gene CTDSPL2 pseudogene 1 Neighboring gene ribosomal protein SA pseudogene 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026739.2 

    Range
    43..1524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    99886625..99888106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    98328879..98330363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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